Take a cell_data_set object or a Seurat object and return the cell metadata in the form of a tibble. The unique cell identifier column is labeled cell_id by default. Prior versions of this function would only accept a cell_data_set. The input argument has been changed from cds to obj to reflect the fact that Seurat objects are now also accepted.
Usage
bb_cellmeta(obj, row_name = "cell_id", cds = NULL)
Arguments
- obj
A cell_data_set or Seurat object.
- row_name
Optional name to provide for cell unique identifier, Default: 'cell_id'
- cds
Provided for compatibility with prior versions, Default: NULL
Details
If a value is supplied for cds, a warning will be issued and the function will pass the value of cds to obj.