A function to reduce go terms by semantic similarity

A function to reduce go terms by semantic similarity

Usage

bb_gosummary(
  x,
  reduce_threshold = 0.8,
  go_db = c("org.Hs.eg.db", "org.Dr.eg.db", "org.Mm.eg.db")
)

Arguments

x

A list go term enrichment results produced by bb_goenrichment.

reduce_threshold

The degree of term reduction. 0 to 1. Higher is more reduction.

go_db

The database to query. Choose from c("org.Hs.eg.db", "org.Dr.eg.db", "org.Mm.eg.db", ...).

Value

A list of items for downstream plotting