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Plot SummarizedHeatmap colData

Source: R/heatmap_plotting.R
bb_plot_heatmap_colData.Rd

Will generate a ggplot from the colData of a SummarizedHeatmap object. Typically this will be placed at the top or bottom of a plot. If flipped, use the side argument to put the colData on the left or right.

Usage

bb_plot_heatmap_colData(
  obj,
  tile_color = "white",
  vars = colnames(colData(obj)),
  side = c("top", "bottom", "right", "left"),
  manual_pal = NULL
)

Arguments

obj

a SummarizedHeatmap object

tile_color

Outline color for the tiles, Default: 'white'

vars

Variables to plot. Supply a named vector to change the axis text and legend titles for each variable, Default: colnames(colData(obj))

side

Side on which to plot, Default: c("top", "bottom", "right", "left")

manual_pal

a color palette, preferably a named vector corresponding to values of colData, Default: NULL

Value

a ggplot